NC1194: Nanotechnology and Biosensors
Publications (Annual Report):
[2012]
[2012]
Anderson, J. M., Torres-Chavolla, E., Castro, A. B., and Alocilja, E.C. 2011. One step alkaline synthesis of biocompatible gold nanoparticles using dextrin as capping agent. Journal of Nanoparticle Research, 13(7), 2843-2851. DOI 10.1007/s11051-010-0172-3.Anderson, M.J., Fisher, A.R., Ly, A., Alocilja, E.C., Smith, C.B. 2012. Rapid Detection of Escherichia coli O157:H7 Using Competitive Exchange of Fluorescent Surrogate Modified Surfaces in Liquid Media. Sensors & Transducers, 137(2), 254-262.
Anderson, M.J., Zhang, D., and Alocilja, E.C., 2011. Spectral and electrical nanoparticle-based molecular detection of Bacillus anthracis using copolymer mass amplification. IEEE Transaction on Nanotechnology, 10(1), p. 44-49 (January 2011). http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=5523957&tag=1
Chenxu Yu, Spectroscopic Biosensing for food quality and safety control, Jiangxi Agricultural University, Invited talk, (May 28, 2012)
Cho, D., Matlock-Colangelo, L.; Xiang, C.; Asiello, P. J.; Baeumner, A. J.; Frey, M. W., Electrospun nanofibers for microfluidic analytical systems. Polymer available online. http://dx.doi.org/10.1016/j.polymer.2011.05.026
David Jaroch, Eric McLamore, Wen Zhang, Jin Shi, Jay Garland, M. Katherine Banks, D. Goddard, J., Mandal, S., Nugen, S., Baeumner, A., Erickson, D. Patterning of Nucleic Acid Probes in Optical Nanocavities , Colloids and Surfaces B: Biointerfaces (2010) vol. 76, pp. 375380, doi:10.1016/j.colsurfb.2009.10.041)
Guo, C. and Irudayaraj, J. 2011. Fluorescent Ag clusters via a Protein-directed approach as a Hg(II) ion sensor. Analytical Chemistry. 83(8):2883-9.
Guo, C., Book, B., and Irudayaraj, J. 2011. Protein-directed reduction of Graphene oxide and intracellular imaging. Chemical Communications. 47(47):12658-12660.
Jenkins, D. M., Kubota, R., J. Dong, Y. Li, and D. Higashiguchi. 2011. Handheld device for real-time, quantitative, LAMP-based detection of Salmonella enterica using assimilating probes. Biosensors & Bioelectronics. 30(1):255-260.
K. Yang, D. M. Jenkins, and W.-W. Su. 2011. Rapid concentration of bacteria using submicron magnetic ion exchangers for improving PCR-based multiplex pathogen detection. Journal of Microbiological Methods. 77(3):182-193.
Kadam, D. M, Thunga, M., Srinivasan, G., Grewell, D., Kessler, M., Chenxu Yu, Lamsal, B, Mechanical and Microstructural Properties of Nano Functionalized Corn Zein Protein and Whey Protein Isolate Biopolymers, Biopolymers & Bio composites Workshop, Ames, (August 13-15, 2012)
Kadam, D. M, Thunga, M., Wang, C., Grewell, D., Kessler, M., Chenxu Yu, Lamsal, B, Protein based nano-functionalized antimicrobial films and their properties, 11th Conference of Food Engineering CoFE 2012, Leesburg, (April 1-4, 2012)
Kamikawa, T.L., Mikolajczyk, M.G., Kennedy, M., Zhong, L., Zhang, P., Setterington, E., Scott, D.E., and Alocilja, E.C., 2012. Pandemic influenza detection by electrically active magnetic nanoparticles and surface Plasmon resonance. IEEE Transactions on Nanotechnology, 11(1), 88-96. DOI: 10.1109/TNANO.2011.2157936
Kondapalli, S., Connelly, J.T., Baeumner, A.J., Kirby, BJ. Integrated microfluidic preconcentrator and immunobiosensor Microfluid Nanofluid (2011) DOI 10.1007/s10404-011-0819-0
Kubota, R., A. M. Alvarez, and W.-W. Su, D. M. Jenkins. 2011. Fret-based assimilating probe for sequence specific real-time monitoring of Loop Mediated isothermal AMPlification. Biological Engineering Transactions. 4(2):81-100.
Kubota, R., P. LaBarre, J. Singleton, A. Beddoe, B. H. Weigl, A. M. Alvarez, and D. M. Jenkins. 2011. Non-instrumented nucleic acid amplification (NINA) for rapid detection of Ralstonia solanacearum race 3 biovar 2. Biological Engineering Transactions. 4(2):69-80.
Kubota, R., P. LaBarre, J. Singleton, A. Beddoe, B. H. Weigl, A. M. Alvarez, and D. M. Jenkins. 2012. Molecular diagnostics in a teacup: non-instrumented nucleic acid amplification (NINA) for rapid, low cost detection of Salmonella enterica. Chinese Science Bulletin. (Invited Manuscript for Special English Issue- in Press).
Lee, K., Drachev, V., and Irudayaraj, J. 2011. DNA-Gold nanoparticle networks grown at cell surface marker sites: Diagnostics of cancer stem cells. ACS NANO. 5(3):2109-2117.
Lim S, S Gunasekaran, J-Y Imm. 2012. Gelatin-templated gold nanoparticles as novel time-temperature indicator. J of Food Science 77 (9):N45-49.
Luo, Y., Nartker, S., Wiederoder, M., Miller, H., Hochhalter, D., Drzal, L.T., and Alocilja, E.C., 2012. Novel Biosensor based on Electrospun Nanofiber and Magnetic Nanoparticles for the Detection of E. coli O157:H7. IEEE Transactions on Nanotechnology, 11(4),676-681. http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=06082451
Marshall Porterfield, Jenna L. Rickus. (2011) Cell-Mediated Deposition of Porous Silica on Bacterial Biofilms. Biotechnology and Bioengineering. Vol. 108. Issue 10. 2249-2260. Editors Choice Selection.
McGraw, S., Anderson, M., Alocilja, E.C., Marek, P.J., Senecal, K.J., and Senecal, A.G. 2011. Antibody Immobilization on Conductive Polymer Coated Nonwoven Fibers for Biosensors. Sensors and Transducers, 13, 142-149.
McLamore, E.S., J. Shi, D. Jaroch, J.C. Claussen, A. Uchida, Y. Jiang, W. Zhang, S.S. Donkin, M.K. Banks, K.K. Buhman, D. Teegarden, J.L. Rickus, and D.M. Porterfield. (2011) A self-referencing platinum nanoparticle decorated enzyme-based microbiosensor for real time measurement of physiological glucose transport. Biosensors and Bioelectronics. 26(5): p. 2237-45.
Mura, S., Corrias, F., Stara, G., Piccinini, M., Secchi, N., Marongiu, D., Innocenzi., P., Irudayaraj, J., and Greppi, G. 2011. Innovative composite films of chitosan, methylcellulose and nanoparticles. Nanoscale Food Sci., Engineering & Technology. J. Food Science. 76(7):N54-N60.
Nitkowski, A., Baeumner A.J., Lipson, M. On-chip spectrophotometry for bioanalysis using microring resonators Biomedical Optics Express, vol. 2(2), pp. 272 277 (2011)
Packard, M.M. and Alocilja, E.C. 2012. High-throughput assay for real-time detection and quantification of low concentration, viable Escherichia coli O157:H7 in apple juice. Food Science and Technology Letters, 3(1), 20-23.
Panchapakesan, B., Book, B., Seth R., and Irudayaraj, J. 2011. Gold nanoprobes for theragnostics and diagnostics. Journal of Nanomedicine, 6(10):1-7. Parul Pal, & Shiva K. Rastogi et al. ACS Appl. Mater. and Interfaces, 2011, 3, 279 [4.525]
Patel, S., D. Showers, P. Vedantam, T.-R. Tzeng, S. Qian, and X. Xuan, (2012). Microfluidic separation of live and dead yeast cells using reservoir-based dielectrophoresis, Biomicrofluidics, Epub ahead of print, Vol. 6, Issue 3
Ravindranath, S., Henne, K., Thompson, D., and Irudayaraj, J. 2011. Surface-enhanced Raman Imaging of Intracellular Bioreduction of Chromate in Shewanella oneidensis. PLoS ONE. 6(2): e16634 (10 pages).
Ravindranath, S., Henne, T., Thompson, D., and Irudayaraj, J. 2011. Intracellular bioreduction of Chromate-decorated Gold nanoparticles by
Shewanella oneidensis MR-1 by Raman chemical imaging. ACS NANO. 5(6):4729-36. Ravindranath, S., Wang, Y., Irudayaraj, J. 2011. SERS driven Cross-platform based multiplex pathogen detection. Sensors & Actuators: B. Chemical. 152: 183-190.
Setterington, E. and Alocilja, E.C. 2012. Electrochemical Biosensor for Rapid and Sensitive Detection of Magnetically Extracted Bacterial Pathogens. Biosensors, 2, 15-31. doi:10.3390/bios2010015
Setterington, E.B., Cloutier, B.C., Ochoa, J.M., Cloutier, A.K., Jain, P., Alocilja, E.C. 2011. Rapid, sensitive, and specific immunomagnetic separation of foodborne pathogens. International Journal of Food Safety, Nutrition and Public Health, 4(1):83-100.
Setterington, E.H. and Alocilja, E.C., 2011. Rapid electrochemical detection of polyaniline-labeled Escherichia coli O157:H7. Biosensors and Bioelectronics, 26(5), 2208-2212 (http://dx.doi.org/10.1016/j.bios.2010.09.036).
Shi, J,; Claussen, JC; McLamore, ES; ul Haque, A; Jaroch, D; Diggs, AR; Calvo-Marzal, P; Rickus, JL; Porterfield, DM. (2011) A comparative study of enzyme immobilization strategies for multi-walled carbon nanotube glucose biosensors. Nanotechnology. Vol. 22, Issue 35.
Shi, J., E. McLamore, D. Jaroch, J. Claussen, J. Rickus, and D.M. Porterfield. (2011) Oscillatory glucose flux in INS1 pancreatic beta cells: A self-referencing microbiosensor study. Analytical Biochemistry Vol 411. 185-193.
Shiva K. Rastogi et al. ACS Appl. Mater. and Interfaces, 2011, 3, 1731 [4.525]
Shiva K. Rastogi et al. J. of Nanopart. Res., 2012, 14, 673; [3.287]
Shiva K. Rastogi et al. Nanomedicine: NBM, 2011, 7, 305 [6.692]
Shiva K. Rastogi et al. Sensors & Transducers Journal, 2009, 7, 191 Srinivasan, S., Aslan, A., Xagoraraki, I., Alocilja, E., Rose, J.B. 2011. Escherichia coli, enterococci, and Bacteroides thetaiotaomicron qPCR signals through wastewater and septage treatment. Water Research, 45, 2561-2572.
Sun, L., Chenxu Yu, J. Irudayaraj, Profiling slternative splicing in breast cancer cells by surface enhanced Raman spectroscopy, Nano-2012, International Conference and exhibition on nanotechnology and nanomedicine, Omaha (March 12-14, 2012)
Tae-Gon Cha, Benjamin A. Baker, M. Dane Sauffer, Janette Salgado, David Jaroch, Jenna L. Rickus, D. Marshall Porterfield, and Jong Hyun Choi. (2011) Optical Nanosensor Architecture for Cell-Signaling Molecules Using DNA Aptamer-Coated Carbon Nanotubes. ACS Nano. 5 (5), pp 42364244
Torres-Chavolla, E., and Alocilja, E.C. 2011. Nanoparticle based DNA biosensor for tuberculosis detection using thermophilic helicase-dependent isothermal amplification. Biosensors and Bioelectronics, 26(11), 4614 4618 (July 2011), http://dx.doi.org/10.1016/j.bios.2011.04.055
Tzeng, T.-R., Y.R. Cheng, R. Saeidpourazar, S.S. Aphale, N. Jalili, (2011). Adhesin-Specific Nanomechnical Cantilever Biosensors for Detection of Microorganisms, Journal of Heat Transfer, 133, Issue 1
Vedantam, P., T.-R. Tzeng, (2012). Binding of Escherichia coli to functionalized gold nanoparticles. Plasmonics, Epub ahead of print, Vol. 7, Number 2, 301-308
Vetrone, S.A., Huarng, M.C., and Alocilja, E.C. 2012. Detection of Non-PCR Amplified S. enteritidis Genomic DNA from Food Matrices Using a Gold-Nanoparticle DNA Biosensor: A Proof-of-Concept Study. Sensors, 12, 10487-10499; doi:10.3390/s120810487
Wang, C., Chenxu Yu, Detection of chemical pollutant in water using gold nanoparticles as sensors: a review, Reviews in Analytical Chemistry, in press
Wang, C., Yoo, C., Chenxu Yu, Kim, T., Photocatalyst aided alkaline pretreatment and Raman spectroscopic characterization of corn stover biomass, ASABE annual meeting, Dallas, (July 29-August 3, 2012)
Wang, Q. and Chenxu Yu, Chapter 3. Chemical and Biological Sensing and imaging using plasmonic nanoparticles and nanostructures in Biomedical nanosensors, edited by J. Irudayaraj, pp. 59-96, Pan Stanford Publishing Pte. Ltd., 2012
Wang, Q., S. Lonergan and Chenxu Yu, Rapid determination of pork sensory quality using Raman spectroscopy, Meat Science, 91, 232-239, 2012
Wang, Y. and Irudayaraj, J. 2011. A SERS DNAzyme biosensor for lead ion detection. Chemical Communications. 47:4394-4396. Wang, Y., Chen, J., and Irudayaraj, J. 2011. Nuclear targeting dynamics of gold nanoclusters for enhanced therapy of HER2+ breast cancer. ACS NANO. 5(12):9718-9725.
Xuan, P., Y. Zhang, T.-R. Tzeng, X.F. Wan, F. Luo, (2012). A quantitative structure-activity relationship (QSAR) study on glycan array data to determine the specificities of glycan-binding proteins, Glycobiology, Vol. 2, Issue 4, 552-560
Yoo, C., C. Wang, Chenxu Yu, B. Lamsal and T. Kim, Improved enzymatic hydrolysis of corn tover by nano photocatalyst aided ammonia pretreatment , AIChE Annual meeting, Minneapolis (October 16-12, 2011)
Zeng, J., C. Chen, P. Vedantam, V. Brown, T.-R. Tzeng, X. Xuan, (2012). Three-dimensional magnetic focusing of particles and cells in ferrofluid flow through a straight microchannel, Micromechanics and Microengineering, in press
Zhang, D., Anderson, M.J., Huarng, M.C., and Alocilja, E.C. 2011. Nanoparticle-based Bio-barcoded DNA Sensor for the Rapid Detection of pagA Gene of Bacillus Anthracis. IEEE Transactions on Nanotechnology,10(6), 1433-1438.
Zhu, B., D. Zhou, J. Yang, D. Li, Y. Murata and Chenxu Yu, Effect of thermal treatment on the texture and Microstructure of Abalone muscle (Haliotis discus), Food science and biotechnology, 20(6), 1467-1473, 2011.
Zhu, B., X. Dong, Y, Gao, D. Zhou, J. Yang, D. Li, X. Zhao, T. Ren, W. Ye, H. Tan, Y. Murata and Chenxu Yu, Physicochemical properties and radical scavenging capacities of pepsin-solubilized collagen from sea cucumber Stichopus japonicus, Food Hydrocolloids, 28, 182-188, 2012
Zhu, J., R.C. Canter, G. Keten, P. Vedantam, T.J. Tzeng, and X. Xuan, (2011). Continuous-flow particle and cell separations in a serpentine microchannel via curvature-induced dielectrophoresis, Microfluidics and Nanofluidics, 11, 743-752
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